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Centralities in Biological Networks CentiBiN

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A tool for the computation and exploration of centralities in biological networks such as protein-protein interaction networks. CentiBiN computes 17 different centralities for directed or undirected networks, ranging from local measures, that is, measures that only consider the direct neighbourhood of a network element, to global measures. CentiBiN supports the exploration of the centrality distribution by visualizing central elements within the network and provides several layout mechanisms for the automatic generation of graphical representations of a network.

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CentiBiN classification

CentiBiN specifications

Software type:
Application/Script
Restrictions to use:
None
Programming languages:
Java
Version:
1.4.2
Maintained:
Yes
Interface:
Graphical user interface
Operating system:
Unix/Linux, Mac OS, Windows
Computer skills:
Medium
Stability:
Stable

CentiBiN distribution

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CentiBiN forum

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No open topic.

CentiBiN classification

CentiBiN specifications

Interface:
Web user interface
Programming languages:
Java
Stability:
Stable
Restrictions to use:
None
Computer skills:
Basic
Maintained:
Yes

CentiBiN support

Documentation

Maintainer

  • Dirk Koschützki <>
  • Dirk Koschützki <>

Credits

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Publications

Institution(s)

Department of Molecular Genetics, Leibniz Institute of Plant Genetics and Crop Plant Research, Gatersleben, Germany

Funding source(s)

The German Ministry of Education and Research (BMBF) supported part of this work under grants 0312706A and 0313115.

Link to literature

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