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cerebroViz specifications

Information


Unique identifier OMICS_16235
Name cerebroViz
Software type Package/Module
Interface Command line interface
Restrictions to use None
Input data A matrix of data associated with brain anatomic structures.
Output data Publication quality SVG diagrams with color mapping reflective of the input data
Operating system Unix/Linux
Programming languages R
License GNU General Public License version 3.0
Computer skills Advanced
Version 1.0
Stability Stable
Requirements
XML, grDevices
Maintained Yes

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Documentation


Maintainer


  • person_outline Ethan Bahl

Publication for cerebroViz

cerebroViz citation

library_books

cerebroViz: an R package for anatomical visualization of spatiotemporal brain data

2016
Bioinformatics
PMCID: 5870797
PMID: 28011779
DOI: 10.1093/bioinformatics/btw726

[…] because they do not depict data within an anatomical context. To our knowledge, no tool currently exists to visualize spatiotemporal data for the human brain in an anatomical context.Here, we present cerebroViz, an R package designed to streamline publication-quality anatomical visualizations of spatiotemporal data in the brain. As input, cerebroViz takes any type of experimental data associated w […]


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cerebroViz institution(s)
Department of Psychiatry, University of Iowa Carver College of Medicine, Iowa City, IA, USA
cerebroViz funding source(s)
This work has been supported by a National Institutes of Health award (R01- MH105527).

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