CESAM specifications


Unique identifier OMICS_24263
Alternative name Cis Expression Structural Alteration Mapping
Software type Framework/Library
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux
Programming languages Python
License GNU General Public License version 3.0
Computer skills Advanced
Version 0.0.1
Stability Stable
Requirements plink, tabix, bedtools, vcflib, fastQTL
Maintained Yes



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  • person_outline Hanno Glimm <>
  • person_outline Jan Korbel <>

Publication for Cis Expression Structural Alteration Mapping

CESAM institution(s)
European Molecular Biology Laboratory (EMBL), Genome Biology Unit, Heidelberg, Germany; The Finsen Laboratory, Rigshospitalet, University of Copenhagen, Copenhagen, Denmark; [etc.]
CESAM funding source(s)
Supported in part by Network of Excellence funding by the European Commission (260791), grants from the German Ministry for Science and Education (BMBF) (01KU1505F; 01ZX1303A; 01ZX1406), a European Research Council (ERC) Starting Grant (336045), the Danish Medical Research Council (DFF-4183-00233), the DFG (KFO 227/BA 4806/1-2 and KFO 227/GL286/1-1), the Baden–Württemberg Stiftung (P-LS-ASII/33), iMed (Helmholtz Initiative on Personalized Oncology), the EU framework program Horizon2020 (TRANSCAN-2 ERA-NET), and the German Cancer Aid (Colon-Resist-Net); through an SNSF Early Postdoc Mobility Fellowship (P2ELP3_155365) and an EMBO Long-Term Fellowship (ALTF 755-2014); by a scholarship from the German Cancer Research Center; and by the Heidelberg School of Oncology.

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