ChainFinder specifications

Information


Unique identifier OMICS_29563
Name ChainFinder
Software type Application/Script
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux
Programming languages MATLAB
Computer skills Advanced
Stability Stable
Requirements
MATLAB Compiler Runtime
Registration required Yes
Maintained No

Versioning


No version available

Maintainers


This tool is not available anymore.

Publication for ChainFinder

ChainFinder institution(s)
Harvard Medical School, Boston, MA, USA ; The Broad Institute of Harvard and MIT, Cambridge, MA, USA; Department of Medical Oncology, Dana-Farber Cancer Institute, Boston, MA, USA; Center for Cancer Genome Discovery, Dana-Farber Cancer Institute, Boston, MA, USA; Department of Pediatric Oncology, Dana-Farber Cancer Institute, Boston, MA, USA; Centre for Integrative Biology, University of Trento, Povo, Trento, Italy; Department of Physics of Complex Systems, Weizmann Institute of Science, Rehovot, Israel; Department of Pathology and Laboratory Medicine, Weill Cornell Medical College, New York, NY, USA; Institute for Computational Biomedicine, Department of Physiology and Biophysics, Weill Cornell Medical College, New York, NY, USA; Lefrak Center of Robotic Surgery & Center for Prostate Cancer Research & Clinical Care, Weill Cornell Medical College, New York, NY, USA; Brady Foundation Department of Urology, Weill Cornell Medical College, New York, NY, USA; Department of Medicine, Division of Hematology and Medical Oncology, Weill Cornell Medical College, New York, NY, USA; Division of Genetics, Brigham and Women’s Hospital, Boston, MA, USA; Department of Pathology, Memorial Sloan-Kettering Cancer Center, New York, NY, USA; Howard Hughes Medical Institute, Chevy Chase, MD, USA; Department of Biology, MIT, Cambridge, MA, USA; Whitehead Institute for Biomedical Research, Cambridge, MA, USA
ChainFinder funding source(s)
Supported by the US National Human Genome Research Institute (NHGRI) Large Scale Sequencing Program (U54 HG003067), the Kohlberg Foundation, the Starr Cancer Consortium, the Prostate Cancer Foundation, US Department of Defense Synergy Awards (PC101020) and New Investigator Award (PC094516), the Dana-Farber/Harvard Cancer Center Prostate Cancer SPORE (US National Institutes of Health (NIH) P50CA090381), the US National Cancer Institute, Early Detection Research Network (U01CA111275 and NCI EDRN, the US National Cancer Institute (R01 CA125612), the Fondazione Trentina per la Ricerca sui Tumori, the Swiss Science Foundation (PASMP3_134379/1), the National Institute of General Medical Sciences award number T32GM007753 and a US NIH Director’s New Innovator Award (DP2OD002750) and a grant from Novartis.

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