ChAMP specifications

Information


Unique identifier OMICS_01796
Software type Package/Module
Interface Command line interface, Graphical user interface
Restrictions to use None
Biological technology Illumina
Operating system Unix/Linux, Mac OS, Windows
Programming languages R
License GNU General Public License version 3.0, GNU General Public License version 2.0
Computer skills Advanced
Version 2.8.9
Stability Stable
Requirements minfi, ChAMPdata, FEM, DMRcate, Illumina450ProbeVariants.db, IlluminaHumanMethylationEPICmanifest
Maintained Yes

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Documentation


Maintainers


  • person_outline Andrew Teschendorff <>
  • person_outline Stephan Beck <>
  • person_outline Tiffany Morris <>
  • person_outline Andrew Feber <>

ChAMP articles

ChAMP institution(s)
CAS Key Lab of Computational Biology, CAS-MPG Partner Institute for Computational Biology, Shanghai Institute for Biological Sciences, Chinese Academy of Sciences, Shanghai, China; Medical Genomics Group, Paul O’Gorman Building, UCL Cancer Insitute, University College London, London, UK; Cambridge Epigenetix, Jonas Webb Building, Babraham Campus, Cambridge, UK; Statistical Genomics, UCL Cancer Institute, University College London, London, UK; Department of Women’s Cancer, University College London, London, UK
ChAMP funding source(s)
Supported by the Royal Society and Chinese Academy of Sciences (Newton Advanced Fellowship 164914), Chinese Scholarship Council (CSC), the MRC (MR/M025411/1) and the UCLH/UCL Comprehensive Biomedical Research Centre and grant NIHR-BTRU-2014-10074 from the National Institute for Health Research (NIHR) Blood & Transplant Research Unit (BTRU).

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