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ChangePoint specifications

Information


Unique identifier OMICS_04052
Name ChangePoint
Software type Package/Module
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux
Programming languages Java
Computer skills Advanced
Version 0.1.1
Stability Stable
Maintained Yes

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Publication for ChangePoint

ChangePoint in pipeline

2016
PMCID: 4951197
PMID: 27431763
DOI: 10.7554/eLife.13087.060

[…] the point at which the statistical properties of a sequence of observations change. the analysis of changepoints in the signal mean was carried out using functions implemented in the r package ‘changepoint’ (). an exact method with favorable computational cost was recently introduced in context of time-series data (). this method called pelt was selected to detect the changepoints […]


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ChangePoint in publications

 (60)
PMCID: 5786086
PMID: 29374166
DOI: 10.1038/s41467-018-02846-4

[…] at ~1450 c. e. and displays an increasing trend into the current era. this event, situated at the onset of the lia, is also identified as a time period containing a statistically significant changepoint (gray histogram in fig. ) using a bayesian methodology in the stacked δ18osw reconstruction. over the full duration of the canonically defined lia, the garrison basin record indicates […]

PMCID: 5735175
PMID: 29255207
DOI: 10.1038/s41598-017-17983-x

[…] piecewise linear function that approximately minimizes the approximation error, while taking account prior knowledge of typical eye movement characteristics., a similar problem is often discussed as changepoint detection, and it’s been that a globally optimal solution for such problems can be found in linear time using the pruned exact linear time (pelt) method. the pelt method builds […]

PMCID: 5887954
PMID: 29250814
DOI: 10.1002/sim.7585

[…] through comparison of the log‐likelihoods and akaike information criterion (aic) values of the tested models, it was determined that inclusion of the term exp(−3*tkij) to account for the changepoint in the trajectory gave the best fit. as such, the joint models fitted to each study within the indana dataset had the following format: […]

PMCID: 5599608
PMID: 28912473
DOI: 10.1038/s41598-017-11174-4

[…] ranges from a minimum separation of 0.6 km (no clustering) to 15 km (maximum clustering) in increments of 0.6 km. a change point analysis was performed based on the number of clusters using the changepoint r library. a single change point occurred at 3.6 km and haul outs were aggregated to this scale for the remainder of the analysis. telemetry clusters were defined as having telemetry data […]

PMCID: 5583311
PMID: 28831655
DOI: 10.1007/s10493-017-0160-8

[…] the better conditions for the oviposition by the tick. we checked for significant differences in the duration of the growing season between the tick-positive and negative sites, using the package “changepoint” (killick and eckley ) for r. the hypothesis is that the length of the growing season for the complete series 1982–2006 would show significantly different values between the tick-positive […]


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ChangePoint institution(s)
Department of Computer Science, New Jersey Institute of Technology, Newark, NJ, USA; Department of Biostatistics and Epidemiology, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA, USA

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