Provides information about the channels (pores and tunnels) found in entries from the Protein Data Bank (PDB). ChannelsDB is a resource that contains information about the presence and positions of channels in biomacromolecular structures and about local geometrical properties and residues lining the channel and their physicochemical properties. It can be useful for analysis which includes the transport of ligands and other small molecules within biomacromolecular structures.
CEITEC - Central European Institute of Technology, Masaryk University Brno, Brno-Bohunice, Czech Republic; National Centre for Biomolecular Research, Faculty of Science, Kamenice, Brno-Bohunice, Czech Republic; Regional Centre of Advanced Technologies and Materials, Department of Physical Chemistry, Faculty of Science, Palacky University, Olomouc, Czech Republic
ChannelsDB funding source(s)
Supported by ELIXIR CZ research infrastructure project (MEYS) [LM2015047]; Ministry of Education, Youth and Sports of the Czech Republic under the project CEITEC 2020 [LQ1601]; ELIXIREXCELERATE project, which has received funding from the European Union’s Horizon 2020 research and innovation programme ; Czech Republic [P208/12/G016]; Ministry of Education, Youth and Sports of the Czech Republic [project NPUIILO1305] and Palack´y University Olomouc [IGA PrF 2017 028].