CSAH specifications
- Unique identifier:
- OMICS_16357
- Interface:
- Web user interface
- Input data:
- A protein sequence.
- Output data:
- The sequence with CSAHs highlighted in bold capitals and coloring of charged residues.
- Programming languages:
- Perl
- Version:
- 2.0
- Maintained:
- Yes
- Name:
- Charged Single α-Helices
- Restrictions to use:
- None
- Input format:
- FASTA
- Output format:
- CSV, FASTA
- Computer skills:
- Basic
- Stability:
- Stable
CSAH specifications
- Unique identifier:
- OMICS_16357
- Software type:
- Toolkit/Suite
- Restrictions to use:
- None
- Input format:
- FASTA
- Output format:
- CSV, FASTA
- Programming languages:
- Perl
- Version:
- 2.0
- Requirements:
- Perl libraries, Math:FFT module
- Name:
- Charged Single α-Helices
- Interface:
- Command line interface
- Input data:
- A protein sequence.
- Output data:
- The sequence with CSAHs highlighted in bold capitals and coloring of charged residues.
- Operating system:
- Unix/Linux
- Computer skills:
- Advanced
- Stability:
- Stable
- Maintained:
- Yes
versioning
No versioning.
CSAH distribution
download
CSAH support
Maintainer
- Zoltan Gaspari <>
- Zoltan Gaspari <>
forum
No open topic.
forum
No open topic.
Credits
Publications
-
(Gaspari et al., 2012)
Charged single alpha-helices in proteomes revealed by a consensus prediction approach.
Biochim Biophys Acta.
PMID: 22310480
Institution(s)
Institute of Chemistry, Eötvös Loránd University, Budapest, Hungary; Department of Biochemistry, Eötvös Loránd University, Budapest, Hungary; ELTE-HAS Protein Modelling Group, Budapest, Hungary; Agricultural Biotechnology Center, Gödöll, Hungary
Funding source(s)
This work was supported by grants from the Hungarian Scientific Research Fund (OTKA F68079, K72973, K61784, NI68466, NK81950), by the International Centre for Genetic Engineering and Biotechnology (CRP/HUN09-03), by the European Union and the European Social Fund under the grant agreement no. TÁMOP 4.2.1./B-09/1/KMR-2010-0003, by a János Bolyai Research Fellowship and a Ferenc Deák Fellowship.
User review
0 user reviews
0 user reviews
No review has been posted.
User review
0 user reviews
0 user reviews
No review has been posted.
