CSAH specifications

Unique identifier:
OMICS_16357
Interface:
Web user interface
Input data:
A protein sequence.
Output data:
The sequence with CSAHs highlighted in bold capitals and coloring of charged residues.
Programming languages:
Perl
Version:
2.0
Maintained:
Yes
Name:
Charged Single α-Helices
Restrictions to use:
None
Input format:
FASTA
Output format:
CSV, FASTA
Computer skills:
Basic
Stability:
Stable

CSAH specifications

Unique identifier:
OMICS_16357
Software type:
Toolkit/Suite
Restrictions to use:
None
Input format:
FASTA
Output format:
CSV, FASTA
Programming languages:
Perl
Version:
2.0
Requirements:
Perl libraries, Math:FFT module
Name:
Charged Single α-Helices
Interface:
Command line interface
Input data:
A protein sequence.
Output data:
The sequence with CSAHs highlighted in bold capitals and coloring of charged residues.
Operating system:
Unix/Linux
Computer skills:
Advanced
Stability:
Stable
Maintained:
Yes

versioning

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CSAH distribution

download

CSAH support

Maintainer

  • Zoltan Gaspari <>
  • Zoltan Gaspari <>

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Credits

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Publications

Institution(s)

Institute of Chemistry, Eötvös Loránd University, Budapest, Hungary; Department of Biochemistry, Eötvös Loránd University, Budapest, Hungary; ELTE-HAS Protein Modelling Group, Budapest, Hungary; Agricultural Biotechnology Center, Gödöll, Hungary

Funding source(s)

This work was supported by grants from the Hungarian Scientific Research Fund (OTKA F68079, K72973, K61784, NI68466, NK81950), by the International Centre for Genetic Engineering and Biotechnology (CRP/HUN09-03), by the European Union and the European Social Fund under the grant agreement no. TÁMOP 4.2.1./B-09/1/KMR-2010-0003, by a János Bolyai Research Fellowship and a Ferenc Deák Fellowship.

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