Chemgenome specifications

Information


Unique identifier OMICS_07775
Name Chemgenome
Software type Package/Module
Interface Command line interface
Restrictions to use None
Input data Genome sequence
Input format FASTA
Operating system Unix/Linux
Computer skills Advanced
Version 2.0
Stability Stable
Maintained Yes

Versioning


No version available

Maintainer


  • person_outline Chemgenome

Information


Unique identifier OMICS_07775
Name Chemgenome
Interface Web user interface
Restrictions to use None
Input data Genome sequence
Input format FASTA
Computer skills Basic
Version 2.0
Stability Stable
Maintained Yes

Maintainer


  • person_outline Chemgenome

Publications for Chemgenome

Chemgenome citations

 (2)
library_books

Genomes to Hits In Silico A Country Path Today, A Highway Tomorrow: A Case Study of Chikungunya

2013
Curr Pharm Des
PMCID: 3831887
PMID: 23260020
DOI: 10.2174/13816128113199990379

[…] ab initio approach. Physico-chemical properties such as hydrogen bonding, stacking, solvation etc. show clear signatures of the functional destiny of DNA sequences [-], which has formed the basis of Chemgenome. In the present study, we have used Chemgenome, the SCFBio tool (http://www.scfbio-iitd.res.in/chemgenome/chemgenome3.jsp) to produce and interpret structural annotations for the viral geno […]

library_books

Role of remote sensing, geographical information system (GIS) and bioinformatics in kala azar epidemiology

2011
PMCID: 3596716
PMID: 23554714
DOI: 10.1016/S1674-8301(11)60050-X

[…] developed as tools of bionformatics to analyze micro-level data like nucleotide or amino acid sequence data and extract biological information. Gene prediction software (http://www.scfbio-iitd.res.in/chemgenome/chemgenomenew.jsp and http://www.genomethreader.org/) and ‘Sequence alignment software’ (http://blast.ncbi.nlm.nih.gov/Blast.cgi & http://www.ebi.ac.uk/tools/clustalw2) are examples of some […]

Chemgenome institution(s)
Department of Chemistry, Indian Institute of Technology Delhi, New Delhi, India

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