ChiMS statistics

info info

Citations per year

Number of citations per year for the bioinformatics software tool ChiMS

Tool usage distribution map

This map represents all the scientific publications referring to ChiMS per scientific context
info info

Associated diseases


Popular tool citations

chevron_left Image acquisition chevron_right
Want to access the full stats & trends on this tool?

ChiMS specifications


Unique identifier OMICS_26919
Name ChiMS
Alternative name Chicago Imaging Mass Spectrometer
Software type Application/Script
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux
Programming languages LabVIEW
License GNU Lesser General Public License version 3.0
Computer skills Advanced
Stability Stable
CAMERA, mode, gage, vision, pixel, daq, mgi, lava, visa
Maintained Yes




No version available


  • person_outline Luke Hanley

Publication for Chicago Imaging Mass Spectrometer

ChiMS citations


Impact of lower challenge doses of enterotoxigenic Escherichia coli on clinical outcome, intestinal colonization and immune responses in adult volunteers

PLoS Negl Trop Dis
PMCID: 5942845
PMID: 29702652
DOI: 10.1371/journal.pntd.0006442

[…] y higher in subjects with no post-challenge diarrhea compared to subjects with MSD. A similar relationship has been previously noted by Porter and colleagues in their recent systematic review of ETEC CHIMs studies []. However, further investigation is required to establish if LTB IgG levels in serum can serve as an indication of immunity to ETEC.It is noteworthy that in our study, subjects with no […]


Clinical endpoints in the controlled human challenge model for Shigella: A call for standardization and the development of a disease severity score

PLoS One
PMCID: 5874036
PMID: 29590182
DOI: 10.1371/journal.pone.0194325

[…] d for its development. In particular, the score was developed using only data from Shigella CHIM that utilized S. flexneri 2a strain 2457T. While that strain is the most commonly utilized in Shigella CHIMs, the S. sonnei strain 53G, which may have a different clinical disease profile that S. flexneri, is also being re-developed for use in vaccine studies []. Applying the disease to those studies w […]


Assessment and Translation of the Antibody in Lymphocyte Supernatant (ALS) Assay to Improve the Diagnosis of Enteric Fever in Two Controlled Human Infection Models and an Endemic Area of Nepal

Front Microbiol
PMCID: 5660281
PMID: 29109704
DOI: 10.3389/fmicb.2017.02031

[…] ent form in the presence of a literate witness who could attest to the accurate reading of the consent and the agreement of the signatory (Nepal only). Study protocols for the typhoid and paratyphoid CHIMs were approved by the UK National Research Ethics Service (typhoid challenge, 10/H0604/53; paratyphoid challenge, 14/SC/0004; both Oxfordshire Research Ethics Committee A) and for the Nepal field […]


Identification of Novel Serodiagnostic Signatures of Typhoid Fever Using a Salmonella Proteome Array

Front Microbiol
PMCID: 5609549
PMID: 28970824
DOI: 10.3389/fmicb.2017.01794

[…] sponse after oral challenge with virulent S. Typhi, through infection and into convalescence. We aimed to identify and validate novel signatures of antigen/antibody isotype combinations using typhoid CHIMs, before evaluating the performance of these diagnostic signatures in febrile patients in a typhoid-endemic area of Nepal. […]


Highly similar structural frames link the template tunnel and NTP entry tunnel to the exterior surface in RNA dependent RNA polymerases

Nucleic Acids Res
PMCID: 3561941
PMID: 23275546
DOI: 10.1093/nar/gks1251

[…] ruses the highly conserved residues are ADN, rather than GDD, and mutation to GDD increases RNA synthesis activity (). Certain mutations immediately upstream from the GDD motif are lethal in PV: Y326[CHIMS] (). This is similar to the effect of the L241-i-S242 at the downstream edge of Motif A in PV. Near the N-terminal end of Motif C in HCV (HCV T312), the mutation D311A characterizes chronic hepa […]


On the origin of crossover interference: A chromosome oscillatory movement (COM) model

PMCID: 3103480
PMID: 21477316
DOI: 10.1186/1755-8166-4-10

[…] l human males [-]. Similar observations have been made in mice [see e.g. [,,,]].Measurements of chiasmata along the lengths of individual chromosomes (Figure ) have allowed Chiasma Interference Maps (CHIMs) to be produced for each individual human and mouse chromosome, examples of which are shown in Figure , . Looking at these CHIMs it would appear that the frequency distribution of chiasmata is d […]

Want to access the full list of citations?
ChiMS institution(s)
Department of Chemistry, University of Illinois at Chicago, Chicago, IL, USA
ChiMS funding source(s)
Supported by the National Institute of Biomedical Imaging and Bioengineering via Grant No. EB006532 and the U.S. Air Force Surgeon General’s Office of Modernization under Contract No. FA7014-09-2-0003- T4T.

ChiMS reviews

star_border star_border star_border star_border star_border
star star star star star

Be the first to review ChiMS