Main logo
?
tutorial arrow
×
Create your own tool library
Bookmark tools and put favorites into folders to find them easily.

ChIP Enrichment Analysis ChEA

Provides an alternative way for researchers to analyze mRNA expression data in context of genome-wide transcription-factor ChIP-X experiments collected and organized into a prior knowledge database and an interactive web-based software system. With ChEA, users can input lists of mammalian gene symbols for which the program computes over-representation of transcription factor targets from the ChIP-X database. The ChEA database allowed us to reconstruct an initial network of transcription factors connected based on shared overlapping targets and binding site proximity.

User report

tutorial arrow
×
Vote up tools and offer feedback
Give value to tools and make your expertise visible
Give your feedback on this tool
Sign up for free to join and share with the community

0 user reviews

0 user reviews

No review has been posted.

ChEA forum

tutorial arrow
×
Communicate with other users
Participate in the forum to get support for using tools. Ask questions about technical specifications.
Take part in the discussion
Sign up for free to ask question and share your advices

No open topic.

ChEA classification

ChEA specifications

Interface:
Web user interface
Computer skills:
Basic
Maintained:
Yes
Restrictions to use:
None
Stability:
Stable

ChEA distribution

ChEA support

Maintainer

This tool is not available anymore.

Credits

tutorial arrow
×
Promote your skills
Define all the tasks you managed and assign your profile the appropriate badges. Become an active member.
Promote your work
Sign up for free to badge your contributorship

Publications

Institution(s)

Department of Pharmacology and Systems Therapeutics, Systems Biology Center New York (SBCNY), Mount Sinai School of Medicine, One Gustave Levy Place, New York, NY, USA; Mahopac High School, Mahopac, NY, USA

Funding source(s)

National Institutes of Health (grants P50GM071558-01A27398, R01DK088541, R01GM054508, R01DA15446 and KL2RR029885-0109)

By using OMICtools you acknowledge that you have read and accepted the terms of the end user license agreement.