ChIP-seq specifications

Information


Unique identifier OMICS_02103
Name ChIP-seq
Software type Pipeline/Workflow
Interface Command line interface, Graphical user interface
Restrictions to use Academic or non-commercial use
Input data Sequence data
Input format BAM, BED, SGA, FPS, GFF
Output data sga, fps, bed, wig
Biological technology Illumina
Operating system Unix/Linux, Mac OS
Programming languages C, Javascript, Perl, PHP, R
License GNU General Public License version 2.0
Computer skills Advanced
Version 1.5-0
Stability Stable
Maintained Yes

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Documentation


Information


Unique identifier OMICS_02103
Name ChIP-seq
Interface Web user interface
Restrictions to use None
Biological technology Illumina
Programming languages C, Perl
License GNU General Public License version 3.0
Computer skills Basic
Version 1.5.3
Stability Stable
Maintained Yes

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Documentation


Publication for ChIP-seq

ChIP-seq institution(s)
School of Life Sciences, Ecole Polytechnique Fédérale de Lausanne (EPFL), Lausanne, Switzerland; Swiss Institute of Bioinformatics (SIB), Lausanne, Switzerland
ChIP-seq funding source(s)
This work was supported by Swiss National Science Foundation (SNSF) grant 31003A-125193, the Swiss Government via a grant to the Swiss Institute of Bioinformatics, and the SNSF grant CRSII3_154500.

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