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Chloroplast DNA databases | Genome annotation

Chloroplasts are semiautonomous organelles having their own genome (Kabeya and Miyagishima, 2013) and considered to be derived from cyanobacteria through endosymbiosis (Wicke et al., 2011). Apart from their well-known function of photosynthesis,…
PODB
Dataset

PODB Plant Organelles DataBase

A specialized database project to promote a comprehensive understanding of…

A specialized database project to promote a comprehensive understanding of organelle dynamics, including organelle function, biogenesis, differentiation, movement, and interactions with other…

ChloroMitoSSRDB
Dataset

ChloroMitoSSRDB

A comprehensive online database of all SSRs (Simple Sequence Repeats) or STRs…

A comprehensive online database of all SSRs (Simple Sequence Repeats) or STRs (Short Tandem Repeats) or Microsatellites from all sequenced Chloroplast and Mitochondrial genomes available so far…

ChloroplastDB
Dataset

ChloroplastDB Chloroplast genome DataBase

An interactive, web-based database for fully sequenced plastid genomes,…

An interactive, web-based database for fully sequenced plastid genomes, containing genomic, protein, DNA and RNA sequences, gene locations, RNA-editing sites, putative protein families and…

Ziziphus…
Dataset

Ziziphus jujuba chloroplast

Provides access to the complete chloroplast (cp) genome of Ziziphus jujube.…

Provides access to the complete chloroplast (cp) genome of Ziziphus jujube. Ziziphus jujube chloroplast is a genetic resource that can be used to conduct population studies of Ziziphus Mill. and help…

Plastid-LCGbase
Dataset

Plastid-LCGbase

A database which focuses on organizational variability of plastid genes and…

A database which focuses on organizational variability of plastid genes and genomes from diverse taxonomic groups. Plastid-LCGbase contains information from 470 plastid genomes and exhibits several…

GenomeTrakrCP
Dataset

GenomeTrakrCP

Provides chloroplast genome sequences. GenomeTrakrCP contains plants involved…

Provides chloroplast genome sequences. GenomeTrakrCP contains plants involved in foods and dietary supplements, toxin producers, common contaminants and adulterants, and their close relatives. It…

ChloroSSRdb
Dataset

ChloroSSRdb

Provides information of all the three types (perfect, imperfect and compound)…

Provides information of all the three types (perfect, imperfect and compound) of simple sequence repeats (SSRs). In accordance with the growing interest in SSR studies, ChloroSSRdb will prove to be a…

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