Chorogenome Navigator specifications

Information


Unique identifier OMICS_16743
Name Chorogenome Navigator
Restrictions to use None
Community driven No
Data access Browse
User data submission Not allowed
Maintained Yes

Taxon


  • Invertebrates
    • Drosophila melanogaster
  • Primates
    • Homo sapiens
  • Rodents
    • Mus musculus

Maintainer


  • person_outline Thomas Manke

Publication for Chorogenome Navigator

Chorogenome Navigator citation

library_books

High resolution TADs reveal DNA sequences underlying genome organization in flies

2018
Nat Commun
PMCID: 5768762
PMID: 29335486
DOI: 10.1038/s41467-017-02525-w

[…] hallenging Hi-C experiments. They enable quick visualization of specific genes or regions of interest in the context of TADs and loops, to understand gene regulation. We provide a resource called the Chorogenome Navigator (Fig. ) (http://chorogenome.ie-freiburg.mpg.de/), which includes Drosophila, Mouse, and Human Hi-C data sets, already processed by HiCExplorer, along with associated gene annotat […]

Chorogenome Navigator institution(s)
Max Planck Institute of Immunobiology and Epigenetics, Bioinformatics Unit, Freiburg, Germany; Max Planck Institute of Biochemistry, Computational Biology, Martinsried, Germany; Max Planck Institute of Immunobiology and Epigenetics, Sequencing Facility, Freiburg, Germany; University of Freiburg, Department of Computer Science, Freiburg, Germany; Faculty of Biology, University of Freiburg, Freiburg, Germany
Chorogenome Navigator funding source(s)
This work was supported by the German Research Foundation [SFB 992, Project Z01] and a grant from the Federal Ministry of Education and Research through the German Epigenome Programme DEEP [01KU1216G].

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