chroGPS specifications
Information
| Unique identifier | OMICS_20497 |
|---|---|
| Name | chroGPS |
| Software type | Package/Module |
| Interface | Command line interface |
| Restrictions to use | None |
| Operating system | Unix/Linux, Mac OS |
| Programming languages | R |
| License | GNU General Public License version 3.0 |
| Computer skills | Advanced |
| Version | 1.28.0 |
| Stability | Stable |
| Requirements |
methods, stats, graphics, Biobase, GenomicRanges, ICSNP, MASS, cluster, R(>=3.1.0), changepoint, DPpackage
|
| Maintained | Yes |
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Documentation
Maintainers
- person_outline Joan Font-Burgada <>
- person_outline David Rossell <>
- person_outline Fernando Azorin <>
- person_outline Oscar Reina <>
Publications for chroGPS
2018 BioRxiv
DOI: 10.1101/425892
library_books
ChroGPS, a global chromatin positioning system for the functional analysis and visualization of the epigenome.
2014 Nucleic Acids Res
PMCID: 3936722
PMID: 24271395
DOI: 10.1093/nar/gkt1186
chroGPS institution(s)
Institute for Research in Biomedicine, IRB Barcelona, Barcelona, Spain; Institute of Molecular Biology of Barcelona, CSIC, Barcelona, Spain
chroGPS funding source(s)
The Spanish Ministerio de Economia y Competitividad [CSD2006-49, BFU2009-07111 and BFU2012-30724] and the Generalitat de Catalunya [SGR2009-1023].
chroGPS reviews
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