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Chromatin Modified SNPs ChroMoS

Combines genetic and epigenetic data with the goal of facilitating SNPs' classification, prioritization and prediction of their functional consequences. ChroMoS uses a large database of SNPs and chromatin states, but allows a user to provide his/her own genetic information. Based on the SNP classification and interactive prioritization, a user can compute the functional impact of multiple SNPs using two prediction tools, one for differential analysis of transcription factor binding (sTRAP) and another for SNPs with potential impact on binding of miRNAs (MicroSNiPer).

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ChroMoS classification

ChroMoS specifications

Interface:
Web user interface
Computer skills:
Basic
Restrictions to use:
None
Maintained:
No

ChroMoS support

Maintainer

This tool is not available anymore.

Credits

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Publications

Institution(s)

Bioinformatics and Deep-Sequencing Unit, Max-Planck Institute of Immunobiology and Epigenetics, Freiburg, Germany

Funding source(s)

National Genome Research Network (NGRN) grant (01GS1110) of the German Federal Ministry of Education and Research (BMBF)

Link to literature

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