ChromNet specifications

Information


Unique identifier OMICS_11744
Name ChromNet
Software type Application/Script
Interface Command line interface
Restrictions to use None
Input format BAM/BED
Output format JSON
Operating system Unix/Linux
Computer skills Advanced
Stability Stable
Requirements
Julia
Maintained Yes

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Maintainer


  • person_outline Su-In Lee <>

Publication for ChromNet

ChromNet institution(s)
Department of Computer Science and Engineering, University of Washington, Seattle, WA, USA; Department of Medical Biophysics, University of Toronto, Toronto, ON, Canada; Princess Margaret Cancer Centre, Toronto, ON, Canada; Department of Computer Science, University of Toronto, Toronto, ON, Canada; Department of Genome Sciences, University of Washington, Seattle, WA, USA
ChromNet funding source(s)
Supported by a National Science Foundation (NSF) Graduate Research Fellowship (DGE-1256082), a NSF grant (DBI-1355899), a Natural Sciences and Engineering Research Council of Canada grant (RGPIN-2015-03948), a Canada Research Chair in Molecular Oncology, a Canadian Institute for Health Research grant (MOP-275788), and a Canadian Breast Cancer Foundation Ontario Region Doctoral Fellowship.

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