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Cicerone specifications


Unique identifier OMICS_29792
Name Cicerone
Software type Application/Script
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux
Computer skills Advanced
Stability Stable
Maintained Yes


  • Primates
    • Homo sapiens


No version available


  • person_outline Matthew Johnson <>
  • person_outline Cameron McIntyre <>

Publication for Cicerone

Cicerone citations


A Prospective Pilot Trial for Pallidal Deep Brain Stimulation in Huntington’s Disease

PMCID: 4539552
PMID: 26347707
DOI: 10.3389/fneur.2015.00177

[…] and final electrode placement was verified by a postoperative stereotactic ct. an individualized visualization of the volume of tissue activated (vta) was performed with a customized version of cicerone (), as previously described ()., the electrodes were connected to a subcutaneous implanted kinetra® impulse generator (medtronic inc., minneapolis, mn, usa). five to seven days after surgery […]


Anatomical Targets Associated with Abrupt versus Gradual Washout of Subthalamic Deep Brain Stimulation Effects on Bradykinesia

PMCID: 4123847
PMID: 25098453
DOI: 10.1371/journal.pone.0099663

[…] to create a closed polygonal surface, and loaded the surfaces and the original atlas slices into scirun (sci institute, university of utah), which also contained the original nuclei surfaces from cicerone. to register the two atlases, we first confirmed the alignment of both groups of nuclei (x-direction = medial-lateral, y-direction = anterior-posterior, z-direction = dorsal-ventral), […]

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Cicerone institution(s)
Department of Biomedical Engineering, Cleveland Clinic Foundation, Cleveland, OH, USA; Department of Biomedical Engineering, Case Western Reserve University, Cleveland, OH, USA

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