CIDentify specifications

Information


Unique identifier OMICS_19935
Name CIDentify
Alternative name Collision-Induced Dissociation identify
Software type Application/Script
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux, Mac OS, Windows
Programming languages C
Computer skills Advanced
Version 1.1
Stability Stable
Maintained Yes

Versioning


No version available

Maintainer


  • person_outline Richard Johnson

Additional information


CIDentify is part of Lutefisk software.

Publication for Collision-Induced Dissociation identify

CIDentify citations

 (2)
library_books

Homology Driven Proteomics of Dinoflagellates with Unsequenced Genomes Using MALDI TOF/TOF and Automated De Novo Sequencing

2011
PMCID: 3184443
PMID: 21977052
DOI: 10.1155/2011/471020

[…] is a powerful tool for the identification of proteins from organisms with unsequenced genomes [, –]. In the past few years, various sequence similarity search engines, such as MS-BLAST [], FASTS [], CIDentify [], MS-Homology [], and OpenSea [], have been developed and successfully applied in various proteomic studies. Partial sequence tags or complete peptide sequences were deduced directly from […]

library_books

Calibrating E values for MS2 database search methods

2007
Biol Direct
PMCID: 2206012
PMID: 17983478
DOI: 10.1186/1745-6150-2-26

[…] by one method to the E-value reported by another []. Other methods – using correlation, posterior probabilities, score, or Z-score – include, but are not limited to, SEQUEST [], MS-Tag [], Scope [], CIDentify [], Popitam [], ProbID [], and PepSearch []. It is even harder to translate the statistical significance from any of these methods into other methods.Although evaluations of various search e […]

CIDentify institution(s)
Department of Biochemistry, University of Washington, Seattle, WA, USA; Immunex Corporation, Seattle, WA, USA

CIDentify reviews

star_border star_border star_border star_border star_border
star star star star star

Be the first to review CIDentify