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CINPER specifications

Information


Unique identifier OMICS_24149
Name CINPER
Alternative name CSBL INteractive Pathway BuildER
Interface Web user interface
Restrictions to use None
Computer skills Basic
Maintained No

Maintainer


This tool is not available anymore.

Publication for CSBL INteractive Pathway BuildER

CINPER in pipeline

2014
PMCID: 4079066
PMID: 25071821
DOI: 10.3389/fgene.2014.00191

[…] various modules. the proportal database (version 3) was recently updated with new gene cluster definitions (kelly et al., ), so that it now contains 68 (24 host, 44 phage) genomes and 55,622 genes., cinper (http://csbl.bmb.uga.edu/cinper/) is one of the newer websites devoted to prokaryotes, developed by the computations systems biology laboratory at the university of georgia. it focuses […]


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CINPER in publication

PMCID: 4079066
PMID: 25071821
DOI: 10.3389/fgene.2014.00191

[…] and metabolomic studies in cyanobacteria. furthermore, we summarize currently available web-based tools dedicated to cyanobacteria, i.e., cyanobase, cyanoexpress, proportal, cyanorak, cyanobike, and cinper. finally, we present a case study for the freshwater model cyanobacteria, synechocystis sp. pcc6803, to show the power of meta-analysis, and the potential to extrapolate acquired knowledge […]


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CINPER institution(s)
Computational Systems Biology Lab, Department of Biochemistry and Molecular Biology and Institute of Bioinformatics, University of Georgia, Athens, GA, USA; BESC BioEnergy Science Center, University of Georgia, Athens, Georgia, USA; College of Computer Science and Technology, Jilin University, Jilin, China; Key Laboratory of Symbolic Computation and Knowledge Engineering of the Ministry of Education, Jilin University, Jilin, China
CINPER funding source(s)
Supported in part by the National Science Foundation (DEB-0830024, DBI-0542119 and MCB-0958172), the Chinese National Science Foundation (11001106) and the DOE BioEnergy Science Center grant (DE-PS02-06ER64304), which is supported by the Office of Biological and Environmental Research in the Department of Energy Office of Science.

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