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Circ2Traits specifications


Unique identifier OMICS_13225
Name Circ2Traits
Restrictions to use None
Database management system MySQL
Community driven No
Data access File download, Browse
User data submission Not allowed
Maintained Yes


  • Primates
    • Homo sapiens


  • person_outline Jayprokas Chakrabarti

Publication for Circ2Traits

Circ2Traits citations


Circular RNAs: clinical relevance in cancer

PMCID: 5787450
PMID: 29416705
DOI: 10.18632/oncotarget.22846

[…] The website circBase has offered a method to freely access and download the merged and unified data sets of cancer related circRNAs [, ]. The study by Ghosal et al. introduced another detection tool, Circ2Traits, for circRNAs potentially associated with human diseases, like cancers. Using this algorithm, researchers could also get the cancer associated single nucleotide polymorphisms (SNPs) on cir […]


Circular RNAs function as competing endogenous RNAs in multiple types of cancer

PMCID: 5768103
PMID: 29387208
DOI: 10.3892/ol.2017.7348

[…] quencing technology combined with bioinformatics analysis may be applied to predict circRNAs, and multiple circRNA-associated databases have been developed for public use, including circRNAFinder (), Circ2Traits (), find_circ (), CIRCexplorer (), CIRI (), starBase (), CircNet () and circBase (). Identifying more cancer-associated circRNAs and evaluating their underlying mechanisms may assist healt […]


Heterogeneous circRNA expression profiles and regulatory functions among HEK293T single cells

Sci Rep
PMCID: 5663837
PMID: 29089539
DOI: 10.1038/s41598-017-14807-w

[…] t circRNAs have recently been identified in many kinds of species and implicated in important functions in physiological and disease process–. Hence, several comprehensive databases such as CircBase, Circ2Traits, circRNABase, deepBase, and circRNADb, have been developed to merge and unify information of published circRNAs and provide a series of online alignment tools to maintain structure and fun […]


The role of circRNAs in cancers

Biosci Rep
PMCID: 5653918
PMID: 28928231
DOI: 10.1042/BSR20170750

[…] the abstruse complexity of gene regulation and have pushed circRNAs to the burning forefront of biological researches. Moreover, many databases, which will be more perfect, such as circBase, circNet, Circ2Traits, and CircInteractome, provided excellent platforms to further facilitate functional researches on circRNAs [–]. However, current studies on the relationship between circRNAs and disease ph […]


Genome wide profiling of Sus scrofa circular RNAs across nine organs and three developmental stages

PMCID: 5737845
PMID: 28575165
DOI: 10.1093/dnares/dsx022

[…] imals, and humans. Given the emerging understanding of the biological importance of circRNAs and research efforts to understand them, researchers have constructed several circRNA databases, including Circ2Traits, CircNet, deepBase v2.0, CircInteractome, and SomamiR2.0. At present, these databases include human, mouse, and C. elegans circRNAs, but not S. scrofa circRNAs, because identification of c […]


Circular RNAs as Promising Biomarkers: A Mini Review

Front Physiol
PMCID: 4988965
PMID: 27588005
DOI: 10.3389/fphys.2016.00355

[…] deepBase (Zheng L.-L. et al., ). There are also multiple repositories for circular RNAs available such as circBase (Glažar et al., ), CircNet (Liu et al., ), circInteractome (Dudekula et al., ), and circ2traits (Ghosal et al., ). Circular RNAs are characterized by a covalently continuous loop from the 5′ to 3′ ends (Lasda and Parker, ). There are different types of circular RNAs such as exonic ci […]

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Circ2Traits institution(s)
Computational Biology Group, Theory Department, Indian Association for the Cultivation of Science, Kolkata, India; Gyanxet, Kolkata, India; School of Bioscience and Engineering, Jadavpur University, Kolkata, India

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