Circleator specifications

Information


Unique identifier OMICS_05206
Name Circleator
Software type Application/Script
Interface Command line interface
Restrictions to use None
Input data Some reference sequence(s) and annotation.
Output data Some publication-quality scalable vector graphics.
Operating system Unix/Linux
Programming languages Perl
License Artistic License version 2.0
Computer skills Advanced
Version 1.01
Stability Stable
Requirements BioPerl, JSON, Log::Log4perl, SVG, Text::CSV, Vcf, Apache Batik, samtools, vcftools
Maintained Yes

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Documentation


Maintainer


  • person_outline Jonathan Crabtree <>

Additional information


http://jonathancrabtree.github.io/Circleator/documentation.html

Circleator article

Circleator institution(s)
Institute for Genome Sciences, University of Maryland School of Medicine, Baltimore, MD, USA; Department of Microbiology and Immunology, University of Maryland School of Medicine, Baltimore, MD, USA; i3 Institute, University of Technology, Sydney, Australia; Department of Microbial Pathogenesis, University of Maryland Dental School, Baltimore, MD, USA; Center for Health-Related Informatics and Bioimaging, University of Maryland, College Park, MD, USA; Department of Epidemiology and Public Health, University of Maryland School of Medicine, Baltimore, MD, USA
Circleator funding source(s)
Supported by the National Institute of Allergy and Infectious Diseases, National Institutes of Health, Department of Health and Human Services under contract number HHSN272200900009C and grant U19AI110820.

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