Provides the following resources: (i) novel circRNAs, (ii) integrated miRNA-target networks, (iii) expression profiles of circRNA isoforms, (iv) genomic annotations of circRNA isoforms, and (v) sequences of circRNA isoforms. The CircNet database is to our knowledge the first public database that provides tissue-specific circRNA expression profiles and circRNA–miRNA-gene regulatory networks. It not only extends the most up to date catalog of circRNAs but also provides a thorough expression analysis of both previously reported and novel circRNAs. Furthermore, it generates an integrated regulatory network that illustrates the regulation between circRNAs, miRNAs and genes. The CircNet database will be continuously maintained and updated.
Institute of Bioinformatics and Systems Biology, National Chiao Tung University, HsinChu, Taiwan; Institute of Genomics and Bioinformatics, National Chung Hsing University, Taiwan
CircNet funding source(s)
Ministry of Science and Technology of the Republic of China [MOST 101-2311-B-009-005-MY3, MOST 103-2628-B-009-001-MY3, MOST 103-2320-B-005-004, MOST 104-2621-M-005-005-MY3 and MOST 104-2320-B-005-005]; UST-UCSD International Center of Excellence in Advanced Bioengineering sponsored by the Ministry of Science and Technology I-RiCE Program [MOST 103-2911-I-009-101]; Veterans General Hospitals and University System of Taiwan (VGHUST) Joint Research Program [VGHUST103-G5-11-2]. MOE ATU.