CirComPara specifications

Unique identifier:
OMICS_19182
Interface:
Command line interface
Input data:
Some RNA-seq reads from Illumina sequencing, references genome, gene/transcript annotations.
Operating system:
Unix/Linux
Computer skills:
Advanced
Stability:
Stable
Software type:
Pipeline/Workflow
Restrictions to use:
None
Input format:
FASTA, GTF
Programming languages:
Python, R
Version:
0.1.3
Registration required:
Yes

versioning

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CirComPara distribution

download

CirComPara support

Documentation

Maintainers

This tool is not maintained anymore.

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Publications

Institution(s)

Department of Molecular Medicine, University of Padova, Padova, Italy; Department of Women’s and Children’s Health, University of Padova, Padova, Italy

Funding source(s)

Supported by SB Fondazione Cassa di Risparmio di Padova e Rovigo Progetti di Eccellenza 2011/2012 by Ministero dell’Istruzione, dell’Università e della Ricerca PRIN 2010/11 (2010NYKNS7_002) and University of Padova; GteK Fondazione Cariplo, Ministero dell’Istruzione, dell’Università e della Ricerca FIRB RBAP11TF7Z and University of Padova.

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