CircosVCF specifications

Information


Unique identifier OMICS_19506
Name CircosVCF
Interface Web user interface
Restrictions to use None
Input format VCF
Computer skills Basic
Stability Beta
Maintained Yes

Documentation


Maintainer


  • person_outline Mali Salmon-Divon <>

Publication for CircosVCF

CircosVCF in publication

PMCID: 5857379
PMID: 29345219
DOI: 10.1099/mgen.0.000152

[…] by >2 (high stringency). gene ontology (go) annotations and analyses of up/down-regulation of pathways were carried out using the david online tool []. circos diagrams were constructed using circosvcf [], plotting differential expression for each coding sequence. also included were genomic islands as predicted by island viewer 3.0 [], secondary metabolite gene clusters as predicted […]


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CircosVCF institution(s)
Agriculture and Oenology Research Department, Eastern R&D Center, Ariel, Israel; Department of Molecular Biology, Ariel University, Ariel, Israel
CircosVCF funding source(s)
Supported by the Jewish National Fund [grant number 90-23-020-12].

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