Allows the discovery of circRNAs and their interactions with miRNAs. circTools investigates the high-throughput AGO CLIP-Seq and RNA-Seq data to proceed. It employs functionalities of circSeeker, circAnno, clipSearch and offers a web interface to simplify their utilization. This tool was designed to ease the study of circRNA-miRNA interactions.
School of Medicine, South China University of Technology, Guangzhou, China; Department of Surgery, Li Ka Shing Faculty of Medicine, University of Hong Kong, Pok Fu Lam, Hong Kong; Key Laboratory of Gene Engineering of the Ministry of Education, Guangzhou, China; State Key Laboratory for Biocontrol, Sun Yat-sen University, Guangzhou, China
circTools funding source(s)
Supported by the National Natural Science Foundation of China (Nos. 31370791, 91440110); Funds from Guangdong Province (Nos. S2012010010510, S2013010012457); the project of Science and Technology New Star in ZhuJiang Guangzhou city (No. 2012J2200025); Fundamental Research Funds for the Central Universities (Nos. 2011330003161070, 14lgjc18); China Postdoctoral Science Foundation (No. 200902348); and seeding project fund at School of Medicine, South China University of Technology (yxy2016005) and by the Guangdong Province Key Laboratory of Computational Science and the Guangdong Province Computational Science Innovative Research Team.