CircularLogo specifications

Information


Unique identifier OMICS_18706
Name CircularLogo
Software type Package/Module
Interface Command line interface
Restrictions to use License purchase required
Input data Some sequences.
Input format FASTA, JSON
Output data Some circular sequence logos for DNA (or RNA) motifs.
Output format PNG, JPEG, TIFF All platforms
Programming languages Python, Django
License GNU General Public License version 2.0
Computer skills Advanced
Version 1.0.2
Stability Stable
Requirements Biopython, Numpy, Spicy
Maintained Yes

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Versioning


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Maintainer


This tool is not available anymore.

Additional information


http://circularlogo.sourceforge.net/ https://sourceforge.net/projects/circularlogo/

Information


Unique identifier OMICS_18706
Name CircularLogo
Interface Web user interface
Restrictions to use License purchase required
Input data Some sequences.
Input format FASTA, JSON
Output data Some circular sequence logos for DNA (or RNA) motifs.
Output format PNG, JPEG, TIFF
Programming languages Python, Other
License GNU General Public License version 2.0
Computer skills Basic
Stability Stable
Maintained Yes

Download


Maintainer


This tool is not available anymore.

Additional information


http://circularlogo.sourceforge.net/ https://sourceforge.net/projects/circularlogo/

Publication for CircularLogo

CircularLogo institution(s)
Division of Biomedical Statistics and Informatics, Department of Health Sciences Research, Mayo Clinic, Rochester, MN, USA; Department of Biochemistry and Molecular Biology, Mayo Clinic, Rochester, MN, USA
CircularLogo funding source(s)
Supported by the Mayo Clinic Center for Individualized Medicine.

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