cisASE specifications

Unique identifier:
OMICS_12359
Interface:
Command line interface
Input data:
Some DNA-seq and RNA-seq data.
Operating system:
Unix/Linux
Computer skills:
Advanced
Maintained:
No
Software type:
Package/Module
Restrictions to use:
None
Input format:
BAM
Programming languages:
Perl, R

versioning

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cisASE support

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Publications

Institution(s)

Key Laboratory of Computational Biology, CAS-MPG Partner Institute for Computational Biology, Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences, Shanghai, China; Key Laboratory of Systems Biology, Institute of Biochemistry and Cell Biology, Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences, Shanghai, China; Department of Genetics, Albert Einstein College of Medicine, New York, NY, USA; School of Life Science and Technology, Shanghai Jiaotong University, Shanghai, China; Shanghai Center for Bioinformation Technology, Shanghai Industrial Technology Institute, Shanghai, China

Funding source(s)

Supported by the National Basic Research Program of China (2011CB910204, 2011CB510102 and 2010CB529200), the National Key Scientific Instrument and Equipment Development Project (2012YQ03026108), the National Key Technology Support Program (2013BAI101B09) and the Strategic Priority Research Program of the Chinese Academy of Sciences (XDA12000000).

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