CISMAPPER specifications

Information


Unique identifier OMICS_13381
Software type Package/Module
Interface Command line interface
Restrictions to use None
Input data CISMAPPER can take as input any set of loci from the genome of interest.
Input format BED
Output data Generates lists of the TSSs and genes that those regions may regulate.
Operating system Unix/Linux, Mac OS
Computer skills Advanced
Stability Stable
Maintained Yes

Taxon


  • Animals
    • Homo sapiens
    • Mus musculus

Versioning


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Maintainer


  • person_outline Timothy Bailey <>

CISMAPPER article

CISMAPPER institution(s)
Institute for Molecular Bioscience, The University of Queensland, Brisbane, QLB, Australia; School of Chemistry and Molecular Biosciences, The University of Queensland, Brisbane, QLD, Australia; Department of Pharmacology, University of Nevada School of Medicine, Reno, NV, USA
CISMAPPER funding source(s)
This work was supported by National Institutes of Health [R01 GM103544].

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