CisPlusFinder specifications


Unique identifier OMICS_12880
Name CisPlusFinder
Software type Package/Module
Interface Command line interface
Restrictions to use None
Input data Genome sequences
Input format FASTA
Output data CisPlusFinder returns the coordinates of predicted cis-regulatory module.
Output format BED
Operating system Unix/Linux, Mac OS, Windows
Programming languages Perl
License GNU Lesser General Public License version 3.0
Computer skills Advanced
Stability Stable
Requirements Tie-IxHash, BLAST
Maintained Yes



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  • person_outline Nora Pierstorff <>

Publication for CisPlusFinder

CisPlusFinder institution(s)
Institute for Genetics, University of Cologne, Cologne, Germany; Faculty of Life Sciences, University of Manchester, Manchester, UK
CisPlusFinder funding source(s)
This project was supported by a Marie Curie visiting fellowship from the European Commission (HPMT-GH-01-00285-13).

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