CisPlusFinder specifications

Unique identifier:
OMICS_12880
Interface:
Command line interface
Input data:
Genome sequences
Output data:
CisPlusFinder returns the coordinates of predicted cis-regulatory module.
Operating system:
Unix/Linux, Mac OS, Windows
License:
GNU Lesser General Public License version 3.0
Stability:
Stable
Maintained:
Yes
Software type:
Package/Module
Restrictions to use:
None
Input format:
FASTA
Output format:
BED
Programming languages:
Perl
Computer skills:
Advanced
Requirements:
Tie-IxHash, BLAST

versioning

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CisPlusFinder distribution

download

CisPlusFinder support

Maintainer

  • Nora Pierstorff <>

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Credits

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Publications

Institution(s)

Institute for Genetics, University of Cologne, Cologne, Germany; Faculty of Life Sciences, University of Manchester, Manchester, UK

Funding source(s)

This project was supported by a Marie Curie visiting fellowship from the European Commission (HPMT-GH-01-00285-13).

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