CIViC specifications

Information


Unique identifier OMICS_15488
Name CIViC
Alternative name Clinical Interpretations of Variants in Cancer
Restrictions to use None
Database management system PostgreSQL
Community driven Yes
Data access File download, Browse, Application programming interface
User data submission Allowed
Maintained Yes

Taxon


  • Primates
    • Homo sapiens

Documentation


Maintainers


  • person_outline obigriffith
  • person_outline Malachi Griffith

Publications for Clinical Interpretations of Variants in Cancer

CIViC citation

library_books

Genome Informatics 2016

2017
Genome Biol
PMCID: 5240446
PMID: 28093077
DOI: 10.1186/s13059-016-1135-5

[…] Curated Mutations (DoCM). She also described Personalized Variant Antigens by Cancer Sequencing (pVAC-seq), a tool for identifying tumor neoantigens from DNA-seq and RNA-seq data. She also described Clinical Interpretations of Variants in Cancer (CIViC), a platform for crowd-sourcing data on clinical consequences of genomic variants. CIViC has 1565 evidence items describing the interpretation of […]

CIViC institution(s)
McDonnell Genome Institute, Washington University School of Medicine, St. Louis, MO, USA; Siteman Cancer Center, Washington University School of Medicine, St. Louis, MO, USA; Department of Genetics, Washington University School of Medicine, St. Louis, MO, USA; Charité Comprehensive Cancer Center, Charité - Universitätsmedizin Berlin, Berlin, Germany; Michael Smith Genome Sciences Centre, BC Cancer Agency, Vancouver, BC, Canada; Department of Molecular and Experimental Medicine, The Scripps Research Institute, La Jolla, CA, USA; Oncology Data Science Group, Vall d'Hebron Institute of Oncology, Barcelona, Spain; Department of Medicine, Washington University School of Medicine, St. Louis, MO, USA
CIViC funding source(s)
Supported by the National Human Genome Research Institute (NHGRI) of the National Institutes of Health (NIH) under Award Number U54HG003079, by the German Federal Ministry of Education and Research under Award Number 031L0030E and 031L0023B, by the NHGRI under Award Number K99HG007940, by the National Cancer Institute (NCI) of the NIH under Awards Number K22CA188163, K08CA166229 and U01CA209936.

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