CKN-seq specifications

Information


Unique identifier OMICS_23712
Name CKN-seq
Alternative name Convolutional Kernel Network sequencing
Software type Application/Script
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux
Programming languages Python
Computer skills Advanced
Stability Stable
Requirements
numpy, scipy, scikit-learn, pytorch, biopython, pandas, matplotlib, seaborn
Maintained Yes

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Versioning


No version available

Maintainers


  • person_outline Dexiong Chen
  • person_outline Julien Mairal

Publication for Convolutional Kernel Network sequencing

CKN-seq institution(s)
Université Grenoble Alpes, Inria, CNRS, Grenoble INP, LJK, Grenoble, France; Université Lyon, Universite Lyon 1, CNRS, Laboratoire de Biométrie et Biologie Evolutive UMR 5558, Lyon, France
CKN-seq funding source(s)
Supported by grants from ANR (MACARON project ANR-14-CE23-0003-01 and FAST-BIG project ANR-17-CE23-0011-01) and by the ERC grant number 714381 (SOLARIS).

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