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- Software type:
- Restrictions to use:
- Output data:
- It returns a unified FASTQ files with Sanger (PHRED) quality encoding.
- Operating system:
- Computer skills:
- Command line interface
- Input data:
- ClinQC takes raw reads in any native file format of their sequencing platforms.
- Biological technology:
- Illumina, Life Technologies, Roche
- Programming languages:
- GNU Lesser General Public License version 3.0
- Perl 5.12 or higher, Java 1.7 or higher
(Pandey et al., 2016) ClinQC: a tool for quality control and cleaning of Sanger and NGS data in clinical research. BMC bioinformatics.
- Ram Viy Pandey <ramviy.pandey at gmail.com>
Health & Environment Department, Molecular Diagnostics, AIT Austrian Institute of Technology GmbH, Vienna, Austria; Institut für Populationsgenetik, Vetmeduni Vienna, Vienna, Austria
This work was supported by the Austrian Institute of Technology (AIT).
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