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OMIC
00311

Clippers

A program designed to identify long deletions of a genome as well as the RNA splicings using long Illumina reads.

Specifications

Software type:
Package
Interface:
Command line interface
Restrictions to use:
None
Biological technology:
Illumina
Operating system:
Unix/Linux
License:
GNU General Public License version 2.0
Computer skills:
Advanced
Stability:
Stable
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Publications

  • (Chen et al., 2009) PerM: efficient mapping of short sequencing reads with periodic full sensitive spaced seeds. Bioinformatics.
    PMID: 19675096

Classification

Literature

  • (Duan et al., 2013) Comparative studies of copy number variation detection methods for next-generation sequencing technologies. PloS one.
    PMID: 23527109

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