CREST specifications

Information


Unique identifier OMICS_00312
Name Clipping REveals STructure
Interface Web user interface
Restrictions to use None
Computer skills Basic
Stability Stable
Maintained Yes

CREST article

CREST citation

2015
PMCID: 4477877

[…] (bam files) were jointly called for single nucleotide variants and insertion/deletions (indels) using the genome analysis toolkit (gatk) v.3.1 [53], while structural variations were detected using clipping reveals structure (crest) [37,54]. variant level annotations were performed using in-silico tools, such as annovar[55]. these annotations were used to predict the effects of identified […]

CREST institution(s)
Department of Information Sciences, St. Jude Children’s Research Hospital, Memphis, TN, USA; Department of Pathology, St. Jude Children’s Research Hospital, Memphis, TN, USA; Pediatric Cancer Genome Project, St Jude Children’s Research Hospital, Memphis, TN, USA; Department of Computational Biology, St. Jude Children’s Research Hospital, Memphis, TN, USA

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