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CLIPZ | A database and analysis environment for experimentally determined binding sites of RNA-binding proteins

Obsolete

Allows to analyse binding sites of RNA-binding proteins. CLIPZ is a database and an analysis environment which supports the automatic functional annotation of short reads resulting primarily from crosslinking and immunoprecipitation experiments (CLIP) performed with RNA-binding proteins to identify the binding sites of these proteins. The software allows users to upload their own sequence data sets while being able to limit the access to these data to specific users.

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CLIPZ forum

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CLIPZ classification

CLIPZ specifications

Unique identifier:
OMICS_02256
Restrictions to use:
None
Maintained:
Yes
Interface:
Web user interface
Computer skills:
Basic
Availability:
No

CLIPZ support

Maintainer

This tool is not available anymore.

Additional information

A registration is needed to access to tools.

Credits

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Publications

Institution(s)

Biozentrum, University of Basel and Swiss Institute of Bioinformatics, Basel, Switzerland

Funding source(s)

Supported by ProDoc program of the Swiss National Science Foundation [Grants PDAMP3_127218 and PDFMP3_123123] and Swiss Institute of Bioinformatics.

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