CLUSS statistics

To access cutting-edge analytics on consensus tools, life science contexts and associated fields, you will need to subscribe to our premium service.

Subscribe
info

Citations per year

Citations chart
info

Popular tool citations

chevron_left Protein clustering chevron_right
Popular tools chart
info

Tool usage distribution map

Tool usage distribution map
info

Associated diseases

Associated diseases

CLUSS specifications

Information


Unique identifier OMICS_05922
Name CLUSS
Software type Package/Module
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux
Computer skills Advanced
Maintained Yes

Versioning


Add your version

Publication for CLUSS

library_books

CLUSS: clustering of protein sequences based on a new similarity measure.

2007 BMC Bioinformatics
PMCID: 1976428
PMID: 17683581
DOI: 10.1186/1471-2105-8-286
abdellalikelil
abdellalikelil
abdellalikelil
abdellalikelil
abdellalikelil
abdellalikelil
abdellalikelil
abdellalikelil
abdellalikelil
abdellalikelil
abdellalikelil
abdellalikelil

CLUSS in publications

 (6)
PMCID: 3877243
PMID: 24391926
DOI: 10.1371/journal.pone.0084263

[…] predicted fold in hp is also present in the motif generated functional annotations. while in motif discovery using meme suite we first cluster the protein sequences of hps into clusters using cluss , online server and then submit the clustered sequences in the meme suite server. meme suite server identified three motif sites in the clustered hps by default. the mast module of meme suite […]

PMCID: 2955529
PMID: 20976221
DOI: 10.1371/journal.pone.0013409

[…] systems (fedora core 7, kernel 2.6.23.17–88, gcc 4.1.2) , or the program requires a license . thus, the following seven programs were selected for performance assessment (): tribe-mcl , gspc , cluss , force , mc-upgma , homoclust , and blastclust ., evaluated methods are listed first and the two resulting sub-lists are then sorted chronologically by publication date (older methods first). […]

PMCID: 2939887
PMID: 20856812
DOI: 10.1371/journal.pone.0012460

[…] lms for local matching score, to assess local similarity between sequences without the use of sequence alignment. the principle is outlined in . it is in essence similar to what is proposed in the cluss software , but we essentially introduced modifications in the normalization scheme., the principle is to detect identical short patterns of length that are common to two sequences and . […]

PMCID: 2845121
PMID: 20102636
DOI: 10.1186/1471-2180-10-21

[…] that they could use chitotriose and chitohexose in the absence of free glcnac., in another set of growth experiments, rabbit serum was replaced with a lipid supplement previously described by cluss et al [] to rule out the possibility of residual chitinase activity in boiled serum that was not detected by the artificial fluorescent substrates. cells were subcultured at least twice […]

PMCID: 2777906
PMID: 19857261
DOI: 10.1186/1472-6807-9-68

[…] csi mixtures., in order to assess the performance of our method in comparison to other state-of-the-art procedures, we computed clusterings for all the data sets using five different methods. the cluss 3.0 [,] algorithm is a tree-based clustering method which does not rely on an alignment. in the original papers cluss has been compared with favorable results to a variety of protein clustering […]


To access a full list of publications, you will need to upgrade to our premium service.

CLUSS institution(s)
Département d'informatique, Faculté des Sciences, Université de Sherbrooke, Sherbrooke, QC, Canada

CLUSS reviews

star_border star_border star_border star_border star_border
star star star star star

Be the first to review CLUSS