Clust protocols

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description
Clust computational protocol

Clust specifications

Information


Unique identifier OMICS_24103
Name Clust
Software type Package/Module
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux
Programming languages Python
Computer skills Advanced
Version 1.4.0
Stability Stable
Requirements
numpy, scipy, matplotlib, sklearn, sompy, joblib, portalocker
Maintained Yes

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Documentation


Maintainer


  • person_outline Steven Kelly <>

Publication for Clust

Clust IN pipeline

2014
PMCID: 4122925
PMID: 24923324
DOI: 10.1093/gbe/evu127

[…] euryarchaeota, thaumarchaeota, nanoarchaeota, korarchaeota, and unclassified archaea) was calculated for each fosmid and the resulting data matrix was processed with a quality cluster method (qt_clust) (heyer et al. 1999) with mev (multiexperiment viewer; http://www.tm4.org/mev.html, last accessed june 25, 2014) (saeed et al. 2003). this provided a preliminary ascription of fosmids […]

Clust institution(s)
Department of Plant Sciences, University of Oxford, South Parks Road, Oxford, UK

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