ClustEval statistics
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Citations per year
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Tool usage distribution map
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Associated diseases
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Popular tool citations
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Gene expression clustering
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ClustEval specifications
Information
| Unique identifier | OMICS_11893 |
|---|---|
| Name | ClustEval |
| Interface | Web user interface |
| Restrictions to use | None |
| Computer skills | Basic |
| Stability | Stable |
| Maintained | Yes |
Maintainer
- person_outline Christian Wiwie
Additional information
https://clusteval.readthedocs.io/en/stable/download.html#installdocker
Information
| Unique identifier | OMICS_11893 |
|---|---|
| Name | ClustEval |
| Software type | Application/Script |
| Interface | Command line interface |
| Restrictions to use | None |
| Operating system | Unix/Linux, Mac OS, Windows |
| Programming languages | Java, R |
| Computer skills | Advanced |
| Stability | Stable |
| Maintained | Yes |
Versioning
No version available
Maintainer
- person_outline Christian Wiwie
Additional information
https://clusteval.readthedocs.io/en/stable/download.html#installdocker
Publications for ClustEval
library_books
Guiding biomedical clustering with ClustEval.
2018 Nat Protoc
PMID: 29844526
DOI: 10.1038/nprot.2018.038
2015 Nat Methods
PMID: 26389570
ClustEval citations
(2)
library_books
Model based clustering with certainty estimation: implication for clade assignment of influenza viruses
2016
BMC Bioinformatics
PMCID: 4955158
PMID: 27439701
DOI: 10.1186/s12859-016-1147-x
[…] identity matrix. The multidimensional scaling (MDS) analysis was then conducted using the cmdscale module. We used the function plot3d rgl to display the influenza sequences in 3D space and employed clusteval to calculate the overall cluster certainty. […]
library_books
Molecular Evolution of the Neural Crest Regulatory Network in Ray Finned Fish
2015
Genome Biol Evol
PMCID: 5635593
PMID: 26475317
DOI: 10.1093/gbe/evv200
[…] computational analyses were generated in R (http://www.r-project.org, last accessed October 28, 2015), or Bioconductor (http://www.bioconductor.org, last accessed October 28, 2015), using R packages clusteval, ggbiplot, ggplot2, gplots, grDevices, mclust, and RColorBrewer. […]
ClustEval institution(s)
Institute of Mathematics and Computer Science, University of Southern Denmark, Odense, Denmark; Department of Experimental Bioinformatics, TUM School of Life Sciences Weihenstephan, Technical University of Munich, Munich, Germany
ClustEval funding source(s)
Supported by the VILLUM foundation (Young Investigator grant no. 13154) as well as the Vice Chancellor’s research fund at the University of Southern Denmark (SDU2020 grant MeDA).
ClustEval reviews
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