CMINT specifications

Information


Unique identifier OMICS_17689
Name CMINT
Alternative name Chromatin Module INference on Trees
Software type Package/Module
Interface Command line interface
Restrictions to use None
Input data Genome-wide chromatin mark measurements of m marks in each of n cell types and a tree relating the cell types.
Operating system Unix/Linux
Computer skills Advanced
Stability Stable
Requirements GNU scientific library
Source code URL http://pages.discovery.wisc.edu/~sroy/CMINT/cmint_src.tgz
Maintained Yes

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Documentation


Publication for Chromatin Module INference on Trees

CMINT institution(s)
Department of Biostatistics and Medical Informatics, University of Wisconsin-Madison, Madison, WI, USA; Department of Cell and Regenerative Biology, University of Wisconsin, Madison WI, USA; Wisconsin Institute for Discovery, Madison, WI, USA
CMINT funding source(s)
This work was supported by UW-Madison, Sloan Foundation research fellowship, NIH BD2K grant, US-EPA grant 83573701 and NIH R01GM117339.

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