CNV-seq specifications

Unique identifier:
OMICS_00339
Interface:
Command line interface
Input data:
Aligned read positions
Programming languages:
Perl, R
Stability:
Stable
Software type:
Package/Module
Restrictions to use:
None
Operating system:
Unix/Linux
Computer skills:
Advanced
Maintained:
Yes

versioning

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No versioning.

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Publications

Institution(s)

Department of Biological Sciences, National University of Singapore, Singapore

User review

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1 user review

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1 user review

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Antoine Rousselin's avatar image Antoine Rousselin's country flag

Antoine Rousselin

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I have been using this tool since 2009 for the detection of CNV in genes predisposed to breast and ovarian cancer. After having modified a little original script, adapt the parameters this software is very precise (specificity, sensitivity). But it is not suitable for analysis on a large panel of genes.

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