CNVassoc specifications

Information


Unique identifier OMICS_02609
Name CNVassoc
Software type Package/Module
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux, Mac OS, Windows
Programming languages R
License GNU General Public License version 2.0
Computer skills Advanced
Version 2.1
Stability Stable
Requirements
CNVassocData, mixdist, mclust, survival
Maintained Yes

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Publication for CNVassoc

CNVassoc in publications

 (2)
PMCID: 5417718
PMID: 28472114
DOI: 10.1371/journal.pone.0177014

[…] and at 24 h (ph24ld) and 45 min in the longissimus dorsi muscle (ph45ld)., associations of rq values of the cnvrs with phenotypic records were analyzed with a multiplicative effect model in the cnvassoc r package []. the cnvassoc function incorporates calls by using a latent class model as described in gonzález et al. []. association analyses were performed with the copy number status […]

PMCID: 3265835
PMID: 21403675
DOI: 10.1038/mp.2011.24

[…] aβ1−42 levels. t-tau and p-tau181p levels were log10 transformed to approximate normality before analysis of variance., association analyses of the cr1 lcr1 with disease status were performed using cnvassoc, and normalized signal intensities or dosage quotients obtained from maq analysis. association analyses were performed through logistic regression (adjusted for age, gender and apoe ɛ4 […]


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CNVassoc institution(s)
CIBER Epidemiology and Public Health (CIBERESP), Barcelona, Spain; Cardiovascular Epidemiology & Genetics group, Inflammatory and Cardiovascular Disease Programme, Institut Municipal d'Investigaci/'o Mèdica (IMIM), Barcelona, Spain; Statistics Department, University of Barcelona (UB), Barcelona, Spain; Structural Biology and Biocomputing Programme, Spanish National Cancer Centre (CNIO), Madrid, Spain; Center for Research in Environmental Epidemiology (CREAL), Barcelona, Spain
CNVassoc funding source(s)
The Spanish Ministry of Science and Innovation (MTM2008-02457, BIO2009-12458 and statistical genetics network MTM2010-09526-E (subprograma MTM)). The Juan de la Cierva Program of the Spanish Ministry of Science and Innovation

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