cnvCapSeq statistics

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cnvCapSeq specifications

Information


Unique identifier OMICS_05722
Name cnvCapSeq
Software type Package/Module
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux
Programming languages Java
License GNU Lesser General Public License version 3.0
Computer skills Advanced
Stability Stable
Maintained Yes

Versioning


No version available

Documentation


Publication for cnvCapSeq

cnvCapSeq citation

library_books

An evaluation of copy number variation detection tools for cancer using whole exome sequencing data

2017
BMC Bioinformatics
PMCID: 5452530
PMID: 28569140
DOI: 10.1186/s12859-017-1705-x

[…] developed by the same group using a similar method, which adtex is the modified version of the convex. as a result, we only considered adtex. more recent tools, such as canoes [], exomdepth [], and cnvcapseq [], are not used specifically for cancer; therefore we did not consider them in this study. the list of the tools that we considered in this study and their general characteristics […]


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cnvCapSeq institution(s)
Department of Genomics of Common Disease, School of Public Health, Imperial College London, London, UK; Genome Institute of Singapore, Singapore; Genome Institute of Singapore, Singapore; Institute of Medical Molecular Genetics, University of Zurich, Schlieren, Switzerland; Singapore Eye Research Institute, Singapore National Eye Center, Singapore; Department of Ophthalmology, National University of Singapore, Singapore; Faculty of Infectious and Tropical Diseases, London School of Hygiene and Tropical Medicine, London, UK; Institute for Molecular Bioscience, University of Queensland, St Lucia, Australia

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