cnvCurator specifications

Information


Unique identifier OMICS_10514
Name cnvCurator
Software type Package/Module
Interface Graphical user interface
Restrictions to use None
Input data The inputs for cnvCurator include 1) the CNV calling results in segmented data file format from a chosen somatic CNV caller 2) the read depth file in bigWig format for tumor and matched normal sample, separately, 3) the BAF file in bigWig format for tumor sample, and 4) the read alignment file in Binary Alignment/Map (BAM) format for tumor and matched normal sample, separately.
Operating system Unix/Linux, Mac OS, Windows
Programming languages Java
License GNU Lesser General Public License version 3.0
Computer skills Medium
Version 1.0
Stability Stable
Maintained Yes

Versioning


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Maintainer


  • person_outline Jianmin Wang <>

cnvCurator article

cnvCurator institution(s)
Department of Biostatistics and Bioinformatics, Roswell Park Cancer Institute, Buffalo, NY, USA
cnvCurator funding source(s)
This work was supported by an award from the Roswell Park Alliance Foundation.

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