CNVPanelizer statistics

info info

Citations per year

Number of citations per year for the bioinformatics software tool CNVPanelizer
info

Tool usage distribution map

info info

Associated diseases

info

Popular tool citations

chevron_left CNV detection CNV detection chevron_right
Want to access the full stats & trends on this tool?

CNVPanelizer specifications

Information


Unique identifier OMICS_19452
Name CNVPanelizer
Software type Application/Script
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux, Mac OS, Windows
Programming languages R
License GNU General Public License version 3.0
Computer skills Advanced
Version 1.12.0
Stability Stable
Requirements
methods, stats, plyr, gplots, grid, graphics, BiocGenerics, IRanges, GenomicRanges, Rsamtools, utils, testthat, S4Vectors, GenomeInfoDb, grDevices, ggplot2, RUnit, knitr, reshape2, foreach, stringr, shiny, NOISeq, R(>=3.2.0), openxlsx, exomeCopy, shinyFiles, shinyjs
Maintained Yes

Download


download.png

Versioning


No version available

Documentation


Maintainer


  • person_outline Thomas Wolf

CNVPanelizer citation

library_books

DNA copy number changes define spatial patterns of heterogeneity in colorectal cancer

2017
Nat Commun
PMCID: 5288500
PMID: 28120820
DOI: 10.1038/ncomms14093

[…] esions (see above) is also present in different areas of this single tumour. We picked up a few non-coding or synonymous mutations in several regions ().We next investigated CNVs in all 68 samples by CNVPanelizer. We detected typical alterations previously described in CRC, for example, loss of the short arm of chromosome 17 harbouring TP53 and gain of the long arm of chromosome 20 with GNAS, EDEM […]


Want to access the full list of citations?

CNVPanelizer reviews

star_border star_border star_border star_border star_border
star star star star star

Be the first to review CNVPanelizer