CNVtools pipeline

CNVtools specifications


Unique identifier OMICS_02090
Name CNVtools
Software type Framework/Library
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux, Mac OS, Windows
Programming languages R
Computer skills Advanced
Version 1.60.0
Stability Stable
Requirements Survival
Maintained Yes


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  • person_outline Chris Barnes <>

Publication for CNVtools

CNVtools IN pipeline

PMCID: 5883389
PMID: 29682616
DOI: 10.21956/wellcomeopenres.15113.r31105

[…] samples (figure 1) is impressive. the clustering of the results from the uk biobank samples is also very clear, validating the precision and accuracy of the gaussian mixture models extracted by cnvtools., for the gene expression analyses at the rna level i would agree with the conclusions stated in the first paragraph of the discussion, that although the transcription level for ccl3l1 […]

CNVtools institution(s)
Wellcome Trust Sanger Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge, UK

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