COALA statistics

info info

Citations per year

Number of citations per year for the bioinformatics software tool COALA
info

Tool usage distribution map

This map represents all the scientific publications referring to COALA per scientific context
info info

Associated diseases

info

Popular tool citations

chevron_left Cophylogeny reconstruction chevron_right
Want to access the full stats & trends on this tool?

COALA specifications

Information


Unique identifier OMICS_08815
Name COALA
Alternative name COevolution Assessment by a Likelihood-free Approach
Software type Package/Module
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux
License CeCILL version 2.1
Computer skills Advanced
Version 1.2.1
Stability Stable
Requirements
Java
Maintained Yes

Versioning


No version available

Publication for COevolution Assessment by a Likelihood-free Approach

COALA citations

 (2)
library_books

Phylogenetic framework for coevolutionary studies: a compass for exploring jungles of tangled trees

2016
PMCID: 5804275
PMID: 29491928
DOI: 10.1093/cz/zow018

[…] this review, new methods with their respective software have appeared, for example, Procrustes Approach to Cophylogeny (PACo), which includes statistical approaches with procrustes techniques () and Coevolution Assessment by a Likelihood-free Approach (COALA), including event-based approaches based on Bayesian ABC techniques (Baudet et al. 2015) (in addition to the great advances offered by the c […]

library_books

A Branch Heterogeneous Model of Protein Evolution for Efficient Inference of Ancestral Sequences

2013
Syst Biol
PMCID: 3676677
PMID: 23475623
DOI: 10.1093/sysbio/syt016

[…] ferent amino acid compositions, starting from another set of amino acid frequencies at the root (πr). Therefore, the model is nonreversible, and the position of the root affects the likelihood value. COaLA is inspired from the N2 model initially proposed by (), designed for DNA, in which a single exchangeability matrix is shared by all branches of T, and a distinct vector of equilibrium nucleotide […]


Want to access the full list of citations?
COALA institution(s)
INRIA Grenoble Rhône-Alpes, Montbonnot Saint-Martin, France; Université de Lyon, Lyon, Université Lyon 1, CNRS, UMR5558, Laboratoire de Biométrie et Biologie Évolutive, Villeurbanne, France; Università di Firenze, Dipartimento di Sistemi e Informatica, irenze, Italy; Laboratoire Statistique et Génome, UMR CNRS 8071 & USC INRA, Université d'Évry, Evrey, France

COALA reviews

star_border star_border star_border star_border star_border
star star star star star

Be the first to review COALA