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A constraint based alignment tool that implements a general framework for multiple alignment of protein sequences. COBALT finds a collection of pairwise constraints derived from database searches, sequence similarity and user input, combines these pairwise constraints, and then incorporates them into a progressive multiple alignment.

User report

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COBALT forum

COBALT versioning

No versioning.

COBALT classification

COBALT specifications

Software type:
Framework
Restrictions to use:
None
Programming languages:
C++
Stability:
Stable
Interface:
Command line interface
Operating system:
Unix/Linux
Computer skills:
Advanced

User report

0 user reviews

0 user reviews

No review has been posted.

COBALT forum

No open topic.

COBALT classification

COBALT specifications

Software type:
Framework
Restrictions to use:
None
Computer skills:
Basic
Interface:
Web user interface
Programming languages:
C++
Stability:
Stable

Credits

Publications

Institution(s)

National Center for Biotechnology Information, National Institutes of Health, Department of Health and Human Services, Bethesda, MD, USA

Link to literature

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