COCACOLA statistics

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COCACOLA specifications


Unique identifier OMICS_12174
Software type Package/Module
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux
License GNU General Public License version 2.0
Computer skills Advanced
Stability Stable
Maintained Yes


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  • person_outline Yang Young Lu <>

Publication for COCACOLA

COCACOLA in publications

PMCID: 5943621
PMID: 29774017
DOI: 10.3389/fmicb.2018.00872

[…] in microbial community studies., besides genes or species, assembled contigs have also been used as features to predict disease. several contig binning tools, such as concoct (), maxbin2.0 (), cocacola (), and metagen (), were developed for binning contigs assuming that contigs with similar coverage/relative abundances over different samples come from the same genomes. in particular, […]

PMCID: 5872070
PMID: 29522429
DOI: 10.3390/bios8010022

[…] just before 11:00 patients ingested 23 grams of carbohydrates (15 g as gel—diabalance gel de glucosa acción rápida (esteve, barcelona, spain) and 8 g as an isotonic drink—100 ml of aquarius (the cocacola company, atlanta, ga, usa)). at 10:45, the closed loop system started and at 11:00 the exercise protocol started. two exercise protocols were considered: aerobic and anaerobic. the trials […]

PMCID: 5148923
PMID: 27980708
DOI: 10.1016/j.csbj.2016.11.005

[…] uses a variational bayesian approach for cluster number estimation in combination with the gaussian mixture model (gmm) , which makes the binning independent of human input. similarly to concoct, cocacola works with one feature vector, combining coverage across many samples with genomic signatures. this technique uses l1 distance instead of commonly used euclidian distance to provide […]

PMCID: 5962263
DOI: 10.4172/2161-069X.1000266

[…] not without complications and should be reviewed in detail before attempts at using them [,]. while some of these medical treatments may seem bizarre or anectdotal in nature, some of them, such as a cocacola lavage, have recently been found to be effective based on systematic review (greater than 50% effectiveness when used as a stand alone therapy and greater than 90% as an adjuvant […]

PMCID: 4054058
PMID: 24966778
DOI: 10.4103/1305-7456.130622

[…] group), red wine (dlc öküzgözü 2009, doluca, turkey), coffee (nescafe 3 in 1, turkey; the coffee mixture was prepared by dissolving 4 g of coffee in 200 ml of boiling distilled water), cola (cocacola, turkey), and tea (yellow tea, lipton, turkey; the tea mixture was prepared by leaving a tea bag in 175 -ml of boiling water for 5 min). immersion time was selected as the 15 min, 6 h, 1 […]

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COCACOLA institution(s)
Molecular and Computational Biology Program, Department of Biological Sciences, University of Southern California, CA, USA; Department of Biological Sciences and Wrigley Institute for Environmental Studies, University of Southern California, CA, USA; Center for Synthetic and Systems Biology, TNLIST, Beijing, China; Center for Computational Systems Biology, Fudan University, Shanghai, China
COCACOLA funding source(s)
The research is partially supported by NSF DMS-1043075 and OCE 1136818.

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