CODEX specifications

Information


Unique identifier OMICS_07305
Name CODEX
Alternative names COpy number Detection by EXome sequencing, CODEX2
Software type Package/Module
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux, Mac OS, Windows
Programming languages R
License GNU General Public License version 2.0
Computer skills Advanced
Stability Stable
Maintained Yes

Versioning


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Documentation


Maintainers


  • person_outline Nancy Zhang <>
  • person_outline Yuchao Jiang <>
  • person_outline Yuchao Jiang <>

Additional information


http://www.bioconductor.org/packages/devel/bioc/html/CODEX.html

Publications for COpy number Detection by EXome sequencing

CODEX institution(s)
Department of Biostatistics, Gillings School of Global Public Health, University of North Carolina, Chapel Hill, NC, USA; Department of Genetics, School of Medicine, University of North Carolina, Chapel Hill, NC, USA; Division of Translational Medicine and Human Genetics, Department of Medicine, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA, USA; Abramson Cancer Center, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA, USA; Department of Statistics, The Wharton School, University of Pennsylvania, Philadelphia, PA, USA
CODEX funding source(s)
Supported by the National Institutes of Health (NIH) grant R01 HG006137 and P01 CA142538.

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